Hi again, and sorry I didn't recognize scareddragon's post before mine. Some contents may have been similar and duplicated.
for some reason I'd always felt that Japanese desks were smaller but maybe that was a misconception.Not really a misconception. I attended an all-girls private high school in Japan in the late 70s, and we used very old desks that even we students thought were tiny. I think that in the older days, desks were made smaller, or there were no "standard." But even in the days, there were bigger desks.
You may already know, but here's a Google Image result of the phrase "high school desks" in Japanese language. And can you see the drawing in the top row? That article says that the left on is for senior high and the right is for junior high. The senior high ones have "adjusters" at the spot where the arrow is.
https://www.google.co.jp/search?q=%E9%AB%98%E6%A0%A1%E3%81%AE%E6%9C%BA...Is it rare to have door heights exceeding 2m, like 2.4m with an even higher wall?Yes, unless you're talking about commercial buildings such as stores, restaurants and other public places.
I'm looking for an average apartment size in the Shinjuku area. Low to average income for a two-person home?Well, the "Shinjuku" that tourists talk about is not a residential area at all (although I do have a friend who lives there, and people are like "What?!").
Here is a rough idea, from a real-estate company website, of apartments in the more residential areas of the ward of Shinjuku.
http://minimini.jp/list/line/tokyo/?lnkdiv=8&route=1_2284_10It depends on what kind of two people you're talking about (single-parent and teenager, newlywed etc.), but LDK stands for "living room, dining room, kitchen." For example, 2DK means there is one room that should be used both as dining and kitchen and there are 2 other rooms, which means that a parent & child or a couple might find it suitable for them. However, the typical monthly fee for that in this area starts from 95000 yen, so usually people choose to live elsewhere.
From that page, you can jump to, for example, a list of the six 2-2DK apartments.
http://minimini.jp/list/line/tokyo/?lnkdiv=8&route=1_2284_10You can see the size written in "m2" and you can see more details by clicking the blue icon on each apartment info.