from the shrine , U can easily find KEIHAN-railway's station , and if you look for spending 10 minutes or so for the north, You can find a JR station for FushimiInari -- sorry as it is not populor I forgot the station name.
Anyway, in both railway you have the station of TO--FUKUJI in one place.
I recommend U drop in the temple of To--fukuji.
and ride the city-bus number 202/207 for north.
Keihan's most of train does not stop at Kiyomizu Gojo. Almost all Keihan users who try to visit KIYOMIZU temple get off the train @ NANA-JOE station and try to get on the city bus number 100/206 and ''臨・三条京阪''or temporary-service. But if you are unlucky those three lines are full of passengers who ride em from KYOTO-station.
And in the worst case you got on 208 the wrong line.
Ride city bus from TO---fukuji is my recommendation. Unless you got on 208 you can easily reach GOJO---ZAKA bus stop without ''rush''.
If you try to get in the city bus from Kyoto station to GOJO---ZAKA, plat-form D-1 and D-2 are the right place to line up.