thank you everyone for your help and recommendation. Based on my revised itineary, i think i can max the use of the 7-day JR pass?
Day 1: Arrive in Tokyo.
Should I not get the Suica & NEX package card for 3500 Yen consist of a one way trip from Narita Airport to Tokyo by Narita Express and a Suica card worth 2000 Yen (500 Yen refundable deposit plus 1500 Yen worth of train fares) instead of taking the Keisei Limited Express to Nippori Station (abt 75 mins, 1000 yen) transfer to the JR Yamanote Line to get to Tokyo Station (10 mins, 150 Yen) ?
I am staying at Kurumi Mansion at the Koto-ku.
Day 2: Explore Asakusa (morning) – Sensoji Temple tour + Kappabashi + Nakamise Street + Jakotsuyu Onsen + Adjourn to Harajuku (afternoon).
Day 3: Explore Shinjuku (morning) + Odaiba (afternoon).
Adjourn to Fussa to stay with friend. Am I able to use SUICA pass to get to Fussa?
Day 4: Explore Ginza (Kabukiza et al) + Shibuya (Center Gai + Daikanyama et al) + Roppongi Hill.
Day 5: Explore Fish Market (morning) + Ueno Park (afternoon).
Depart for Hakone in late evening from Tokyo Station via JR Tokaido Main Line. Refund SUICA card.
If I purchase a 7-day JR pass, can I start to exchange it on Day 5 at the Tokyo station?
Day 6: Purchase 2-day Hakone Free pass at Odawara to explore Hakone. Try Tenzan Onsen and Himeshara No Yu Hot Spring onsen as well as visit Fuji Five Lakes/Lake Yamanka
Day 7: Leave Hakone in the morning to Kyoto from Mishima Station via JR Tokaido Shinkasen line or JR "Hikari Hayatoku Kippu" train on a reserved seat. I suppose I can use the 7-day JR-pass. Yes?
Once arrived in Kyoto – get the SURUTTO KANSAI card to go round. Visit the Kiyomizudera temple and Sanjusangendo Hall.
Day 8: Explore Nishiki Market (morning) + Philosopher’s Trail + Pontocho + Gion District. Use SURUTTO pass
Day 9: Day trip to Arashiyama. Use JR pass? to take JR from Kyoto Station to Saga-Arashiyama Station (JR Sagano Line. Visit Togetsukyo Bridge Bamboo Groves. Use SURUTTO pass. Back to Kyoto.
Day 10: Day trip to Nara (morning). Take Miyakoji rapid trains from Kyoto Station and JR Nara Station. Can I use JR Pass here? Visit Nara Park + Horyuji.
Adjourn to Himeji to visit the Himeji Castle (afternoon) Is there a direct train from Nara to Himeiji? Can I use JR pass here? Back to Kyoto late evening.
Day 11: Visit Fushimi Inari Shrine + Tofukuji + Kyoto Toei Movie Land. Use SURUTTO pass
Day 12: Kyoto to Kansai Airport via JR "Haruka" Kansai Airport Limited Express. If I can't use JR pass, can i use the SURUTTO card?
Discount Tickets -
http://o-dekake.net/kinken/tokyo/st@tokyo.html. These are discount tickets on SUICA?
This site is in Japanese. Is there an English site where it can point me to the shops where I can get the discount tickets?
What are some of special passes available?
Sorry to ask so much questions. I think i am on the right track but just want to be sure that I am getting as much savings on transporation as possible.